Re: bug: invalid sha1 pointer in cache-tree
From: Emily Shaffer <hidden>
Date: 2021-11-02 17:06:19
Hi Joel, hopefully someone can correct me for being wrong about this ;) On Thu, Oct 28, 2021 at 10:57 PM Joel Stanley [off-list ref] wrote:
Hello, I've filled out git-bugreport after discussing this issue with a git developer. I'm not sure if it's user error, disk corruption, or a bug in git. Any insight would be appreciated! What did you do before the bug happened? (Steps to reproduce your issue) I was attempting to merge a tag into the current branch. Before I did so, I reset'd away a commit I didn't want: $ git reset HEAD~1 --hard error: Could not read 7c03aa457205afa2def273129653bea6225c5a0a HEAD is now at 387b8b425339 spi: fsi: Print status on error
I suspect you already had problems from this point, regardless of what came after. What's surprising to me, though, is that the object 7c03aa would be missing, since it should have been referred to by the current branch you were trying to merge into. Is it possible you were doing something slightly odd, like partial clone, shallow clone, or working in detached-HEAD for some reason? You didn't mention here that you had been rm-ing things in .git/, and I asked you explicitly about that when we spoke offline, but that also would worry me. Regardless, I think once you've got a missing object and 'git fsck' fails, there aren't many promises we can make about correct behavior after, so I'm not sure I have anything to say on the rest of the report, unfortunately.
Anything else you want to add: I have tree git trees involved: linus, a clone of torvald's tree stable, a bare clone of the stable tree. it was cloned with a --reference to linus openbmc, a clone of a kernel tree that has a --reference to both stable and linus.
Ah, this is a hint and may actually be the winner... When you're cloning with --reference, the "referenced" repo doesn't know who is referencing it, so it sometimes can gc with abandon and delete something you cared about in a referencing repo. The workarounds here range from "if you care only about network speed, reclone with --reference --dissociate" to "if you care about network speed *and* disk space, do something fancy with 'git worktree' and multiple remotes" to "if you care about disk space *and* you care about insulating objects from accidentally going to the wrong remote, get a bigger disk and use --reference --dissociate anyway".
I did a fsck and saw this:
error: 7c03aa457205afa2def273129653bea6225c5a0a: invalid sha1 pointer
in cache-tree
broken link from tree 385b33c97554b2ab43b7dea822b34e10e9d7ce66 (:)
to tree 7c03aa457205afa2def273129653bea6225c5a0a (:configs/)
I have since tried re-fetching all three repositories in turn, and
this had no change:
git fetch-pack --all https://github.com/openbmc/linux
git fetch-pack --all
git://git.kernel.org/pub/scm/linux/kernel/git/torvalds/linux.git
git fetch-pack --all
git://git.kernel.org/pub/scm/linux/kernel/git/stable/linux.git
I also tried removing and re-cloning the stable tree (an the assumption that
this is where the objects that make up the problematic v5.14.14 tag should come
from), but this did not help. I have however changed the output of git fsck:
$ git merge v5.14.14
fatal: unable to read tree 385b33c97554b2ab43b7dea822b34e10e9d7ce66Yeah, I think this is the final decisive pointer to "this is an issue with stable as an alternate to your other stuff" - I'd guess that the object that's missing changed because the alternate links broke in some way.
$ git fsck
...
error: 385b33c97554b2ab43b7dea822b34e10e9d7ce66: invalid sha1 pointer
in cache-tree
broken link from tree 61a337aed7681b506b935b507a422fc5983ba4f3 (:)
to tree 385b33c97554b2ab43b7dea822b34e10e9d7ce66 (:powerpc/)
Please review the rest of the bug report below.
You can delete any lines you don't wish to share.
[System Info]
git version:
git version 2.33.0
cpu: x86_64
no commit associated with this build
sizeof-long: 8
sizeof-size_t: 8
shell-path: /bin/sh
uname: Linux 5.14.0-2-amd64 #1 SMP Debian 5.14.9-2 (2021-10-03) x86_64
compiler info: gnuc: 10.2
libc info: glibc: 2.33
$SHELL (typically, interactive shell): /bin/bash
[Enabled Hooks]
Cheers,
Joel