Ron Garret [off-list ref] writes:
git commit-tree insists on having at least one parent commit at
the command line.
Incorrect. "git commit" might but "git commit-tree" does. Perhaps you
are forgetting that the first object name is a tree to be wrapped.
A short answer is that you don't create a root commit twice in a single
repository, period. Your repository _may_ be end up with more than one
root but that typically is due to you fetching unrelated histories from
different repositories, each created its own root.