Re: [PATCH 3/3] diffcore-rename: guide inexact rename detection based on basenames

4 messages, 3 authors, 2021-02-08 · open the first message on its own page

Re: [PATCH 3/3] diffcore-rename: guide inexact rename detection based on basenames

From: Junio C Hamano <hidden>
Date: 2021-02-07 19:52:09

Derrick Stolee [off-list ref] writes:
Before I get too deep into reviewing these patches, I do want
to make it clear that the speed-up is coming at the cost of
a behavior change. We are restricting the "best match" search
to be first among files with common base name (although maybe
I would use 'suffix'?). If we search for a rename among all
additions and deletions ending the ".txt" we might find a
similarity match that is 60% and declare that a rename, even
if there is a ".txt" -> ".md" pair that has a 70% match.
Yes, my initial reaction to the idea was that "yuck, our rename
detection lost its purity".  diffcore-rename strived to base its
decision purely on content similarity, primarily because it is one
of the oldest part of Git where the guiding principle has always
been that the content is the king.  I think my aversion to the "all
of my neighbors are relocating, so should I move to the same place"
(aka "directory rename") comes from a similar place, but in a sense
this was worse.

At least, until I got over the initial bump.  I do not think the
suffix match is necessarily a bad idea, but it adds more "magically
doing a wrong thing" failure modes (e.g. the ".txt" to ".md" example
would probably have more variants that impact the real life
projects; ".C" vs ".cc" vs ".cxx" vs ".cpp" immediately comes to
mind), and a tool that silently does a wrong thing because it uses
more magic would be a tool that is hard to explain why it did the
wrong thing when it does.
This could be documented in a test case, to demonstrate that
we are making this choice explicitly.
Yes.  I wonder if we can solve it by requiring a lot better than
minimum match when trying the "suffix match" first, or something?

Provided if we agree that it is a good idea to insert this between
"exact contents match" and "full matrix", I have one question to
Elijah on what the code does.

To me, it seems that the "full matrix" part still uses the remaining
src and dst candidates fully.  But if "A.txt" and "B.txt" are still
surviving in the src/dst at that stage, shouldn't we be saying that
"no way these can be similar enough---we've checked in the middle
stage where only the ones with the same suffix are considered and
this pair didn't turn into a rename"?

Thanks.

Re: [PATCH 3/3] diffcore-rename: guide inexact rename detection based on basenames

From: Elijah Newren <hidden>
Date: 2021-02-08 08:42:23

On Sun, Feb 7, 2021 at 11:51 AM Junio C Hamano [off-list ref] wrote:
Derrick Stolee [off-list ref] writes:
quoted
Before I get too deep into reviewing these patches, I do want
to make it clear that the speed-up is coming at the cost of
a behavior change. We are restricting the "best match" search
to be first among files with common base name (although maybe
I would use 'suffix'?). If we search for a rename among all
additions and deletions ending the ".txt" we might find a
similarity match that is 60% and declare that a rename, even
if there is a ".txt" -> ".md" pair that has a 70% match.
Yes, my initial reaction to the idea was that "yuck, our rename
detection lost its purity".  diffcore-rename strived to base its
decision purely on content similarity, primarily because it is one
of the oldest part of Git where the guiding principle has always
been that the content is the king.  I think my aversion to the "all
of my neighbors are relocating, so should I move to the same place"
(aka "directory rename") comes from a similar place, but in a sense
this was worse.

At least, until I got over the initial bump.  I do not think the
suffix match is necessarily a bad idea, but it adds more "magically
doing a wrong thing" failure modes (e.g. the ".txt" to ".md" example
would probably have more variants that impact the real life
projects; ".C" vs ".cc" vs ".cxx" vs ".cpp" immediately comes to
mind), and a tool that silently does a wrong thing because it uses
more magic would be a tool that is hard to explain why it did the
wrong thing when it does.
Stolee explained a new algorithm different than what I have proposed,
I think based on the apparent different meanings of "basename" that
exist.  I tried to clarify that in response to his email, but I wanted
to clarify one additional thing here too:

diffcore-rename has not in the past based its decision solely on
content similarity.  It only does that when break detection is on.
Otherwise, 0% content similarity is trumped by sufficient filename
similarity (namely, with a filename similarity of 100%).  If the
filename similarity wasn't sufficiently high (anything less than an
exact match), then it completely ignored filename similarity and
looked only at content similarity.  It thus jumped from one extreme to
another.

My optimization is adding an in-between state.  When the basename (the
part of the path excluding the leading directory) matches the basename
of another file (and those basenames are unique on each side), then
compare content similarity and mark the files as a rename if the two
are sufficiently similar.  It is thus a position that considers both
filename similarity (basename match) and content similarity together.
quoted
This could be documented in a test case, to demonstrate that
we are making this choice explicitly.
Yes.  I wonder if we can solve it by requiring a lot better than
minimum match when trying the "suffix match" first, or something?
This may still be a useful idea, and was something I had considered,
but more in the context of more generic filename similarity
comparisons.  We could still discuss it even when basenames match, but
basenames matching seems strong enough to me that I wasn't sure extra
configuration knobs were warranted.
Provided if we agree that it is a good idea to insert this between
"exact contents match" and "full matrix", I have one question to
Elijah on what the code does.

To me, it seems that the "full matrix" part still uses the remaining
src and dst candidates fully.  But if "A.txt" and "B.txt" are still
surviving in the src/dst at that stage, shouldn't we be saying that
"no way these can be similar enough---we've checked in the middle
stage where only the ones with the same suffix are considered and
this pair didn't turn into a rename"?
This is a very good point.  A.txt and B.txt will not have been
compared previously since their basenames do not match, but the basic
idea is still possible.  For example, A.txt could have been compared
to source/some-module/A.txt.  And I don't do anything in the final
"full matrix" stage to avoid re-comparing those two files again.
However, it is worth noting that A.txt will have been compared to at
most one other file, not N files.  And thus while we are wasting some
re-comparisons, it is at most O(N) duplicated comparisons, not O(N^2).
I thought about that, but decided to not bother, based on the
following thinking:

1) The most expensive comparison is the first one, because when we do
that one, we first have to populate the list of integers that lines in
the file hash to.  Subsequent comparisons are relatively cheap since
this list of integers has already been computed.

2) This would only save us from at most N comparisons in the N x M
matrix (since no file in this optimization is compared to more than
one other)

3) Checking if two files have previously been compared requires more
code, in what is already a tight nested loop.  My experience
attempting to modify that tight loop for extra conditions (e.g. don't
compare files that are too large), is that it's easy to accidentally
make the code slower.  In fact, this is in part what led to the
addition of the remove_unneed_paths_from_src() function.

4) There were plenty of other interesting ideas and maybe I was a tad lazy.  :-)

I think removing these already-compared cases could be done, but I
just avoided it.  If we were to do the "attempt to match files with
the same extension" optimization that Stolee outlines/invents above,
then we'd definitely need to consider it.  Otherwise, it's just a
minor additional optimization that someone could add to my patches.

Re: [PATCH 3/3] diffcore-rename: guide inexact rename detection based on basenames

From: Derrick Stolee <hidden>
Date: 2021-02-08 11:47:28

On 2/8/2021 3:38 AM, Elijah Newren wrote:
On Sun, Feb 7, 2021 at 11:51 AM Junio C Hamano [off-list ref] wrote:
quoted
Derrick Stolee [off-list ref] writes:
quoted
Before I get too deep into reviewing these patches, I do want
to make it clear that the speed-up is coming at the cost of
a behavior change. We are restricting the "best match" search
to be first among files with common base name (although maybe
I would use 'suffix'?). If we search for a rename among all
additions and deletions ending the ".txt" we might find a
similarity match that is 60% and declare that a rename, even
if there is a ".txt" -> ".md" pair that has a 70% match.
Yes, my initial reaction to the idea was that "yuck, our rename
detection lost its purity".  diffcore-rename strived to base its
decision purely on content similarity, primarily because it is one
of the oldest part of Git where the guiding principle has always
been that the content is the king.  I think my aversion to the "all
of my neighbors are relocating, so should I move to the same place"
(aka "directory rename") comes from a similar place, but in a sense
this was worse.

At least, until I got over the initial bump.  I do not think the
suffix match is necessarily a bad idea, but it adds more "magically
doing a wrong thing" failure modes (e.g. the ".txt" to ".md" example
would probably have more variants that impact the real life
projects; ".C" vs ".cc" vs ".cxx" vs ".cpp" immediately comes to
mind), and a tool that silently does a wrong thing because it uses
more magic would be a tool that is hard to explain why it did the
wrong thing when it does.
Stolee explained a new algorithm different than what I have proposed,
Yes, sorry for adding noise. The point stands that we are changing
the behavior in some cases, so that must be agreed upon. What you
are _actually_ proposing is a much smaller change than I thought,
but it is still worth pointing out the behavior change.
I think based on the apparent different meanings of "basename" that
exist.  I tried to clarify that in response to his email, but I wanted
to clarify one additional thing here too:
quoted
diffcore-rename has not in the past based its decision solely on
content similarity.  It only does that when break detection is on.
Otherwise, 0% content similarity is trumped by sufficient filename
similarity (namely, with a filename similarity of 100%).  If the
filename similarity wasn't sufficiently high (anything less than an
exact match), then it completely ignored filename similarity and
looked only at content similarity.  It thus jumped from one extreme to
another.
This idea of optimizing first for 100% filename similarity is a
good perspective on Git's rename detection algorithm. The canonical
example of this 100% filename similarity is a rename cycle:

	A -> B
	B -> C
	C -> A

Even if the OIDs are distinct and exactly match across these renames,
we see that there are no adds or deletes, so we do not even trigger
rename detection and report A, B, and C as edited instead.

A "rename path" (not cycle) such as:

	A -> B
	B -> C

does trigger rename detection, but B will never be considered. Instead,
"A -> C" will be checked for similarity to see if it is within the
threshold.

Of course, I am _not_ advocating that we change this behavior. These
situations are incredibly rare and we should not sacrifice performance
in the typical case to handle them.
My optimization is adding an in-between state.  When the basename (the
part of the path excluding the leading directory) matches the basename
of another file (and those basenames are unique on each side), then
compare content similarity and mark the files as a rename if the two
are sufficiently similar.  It is thus a position that considers both
filename similarity (basename match) and content similarity together.
quoted
quoted
This could be documented in a test case, to demonstrate that
we are making this choice explicitly.
Yes.  I wonder if we can solve it by requiring a lot better than
minimum match when trying the "suffix match" first, or something?
This may still be a useful idea, and was something I had considered,
but more in the context of more generic filename similarity
comparisons.  We could still discuss it even when basenames match, but
basenames matching seems strong enough to me that I wasn't sure extra
configuration knobs were warranted.
I think this is a complication that we might not want to add to the
heuristic, at least not at first. We might want to have a follow-up
that adjusts that value to be higher. A natural way would be through
a config option, so users can select something incredibly high like
99%. Another option would be to take a minimum that is halfway between
the existing similarity minimum and 100%.
quoted
Provided if we agree that it is a good idea to insert this between
"exact contents match" and "full matrix", I have one question to
Elijah on what the code does.

To me, it seems that the "full matrix" part still uses the remaining
src and dst candidates fully.  But if "A.txt" and "B.txt" are still
surviving in the src/dst at that stage, shouldn't we be saying that
"no way these can be similar enough---we've checked in the middle
stage where only the ones with the same suffix are considered and
this pair didn't turn into a rename"?
This is a very good point.  A.txt and B.txt will not have been
compared previously since their basenames do not match, but the basic
idea is still possible.  For example, A.txt could have been compared
to source/some-module/A.txt.  And I don't do anything in the final
"full matrix" stage to avoid re-comparing those two files again.
However, it is worth noting that A.txt will have been compared to at
most one other file, not N files.  And thus while we are wasting some
re-comparisons, it is at most O(N) duplicated comparisons, not O(N^2).
I thought about that, but decided to not bother, based on the
following thinking:

1) The most expensive comparison is the first one, because when we do
that one, we first have to populate the list of integers that lines in
the file hash to.  Subsequent comparisons are relatively cheap since
this list of integers has already been computed.

2) This would only save us from at most N comparisons in the N x M
matrix (since no file in this optimization is compared to more than
one other)

3) Checking if two files have previously been compared requires more
code, in what is already a tight nested loop.  My experience
attempting to modify that tight loop for extra conditions (e.g. don't
compare files that are too large), is that it's easy to accidentally
make the code slower.  In fact, this is in part what led to the
addition of the remove_unneed_paths_from_src() function.
Even storing a single bit to say "these were already compared" takes
quadratic space. The hope is to not have quadratic behavior if it
can be avoided.
4) There were plenty of other interesting ideas and maybe I was a tad lazy.  :-)

I think removing these already-compared cases could be done, but I
just avoided it.  If we were to do the "attempt to match files with
the same extension" optimization that Stolee outlines/invents above,
then we'd definitely need to consider it.  Otherwise, it's just a
minor additional optimization that someone could add to my patches.
The more I think about it, the less my idea makes sense. I'm sorry
for adding noise to the thread.

Thanks,
-Stolee

Re: [PATCH 3/3] diffcore-rename: guide inexact rename detection based on basenames

From: Elijah Newren <hidden>
Date: 2021-02-08 16:26:29

On Mon, Feb 8, 2021 at 3:44 AM Derrick Stolee [off-list ref] wrote:
On 2/8/2021 3:38 AM, Elijah Newren wrote:
quoted
On Sun, Feb 7, 2021 at 11:51 AM Junio C Hamano [off-list ref] wrote:
quoted
Derrick Stolee [off-list ref] writes:
quoted
Before I get too deep into reviewing these patches, I do want
to make it clear that the speed-up is coming at the cost of
a behavior change. We are restricting the "best match" search
to be first among files with common base name (although maybe
I would use 'suffix'?). If we search for a rename among all
additions and deletions ending the ".txt" we might find a
similarity match that is 60% and declare that a rename, even
if there is a ".txt" -> ".md" pair that has a 70% match.
Yes, my initial reaction to the idea was that "yuck, our rename
detection lost its purity".  diffcore-rename strived to base its
decision purely on content similarity, primarily because it is one
of the oldest part of Git where the guiding principle has always
been that the content is the king.  I think my aversion to the "all
of my neighbors are relocating, so should I move to the same place"
(aka "directory rename") comes from a similar place, but in a sense
this was worse.

At least, until I got over the initial bump.  I do not think the
suffix match is necessarily a bad idea, but it adds more "magically
doing a wrong thing" failure modes (e.g. the ".txt" to ".md" example
would probably have more variants that impact the real life
projects; ".C" vs ".cc" vs ".cxx" vs ".cpp" immediately comes to
mind), and a tool that silently does a wrong thing because it uses
more magic would be a tool that is hard to explain why it did the
wrong thing when it does.
Stolee explained a new algorithm different than what I have proposed,
Yes, sorry for adding noise. The point stands that we are changing
the behavior in some cases, so that must be agreed upon. What you
are _actually_ proposing is a much smaller change than I thought,
but it is still worth pointing out the behavior change.
Again, no need to apologize; if my commit messages weren't clear, they
need to be fixed.  I am much more surprised here by your repeated
point that it's worth pointing out the behavior change.  I totally
agree with that, and it's why I spent two paragraphs on the second
commit message explicitly covering this and listing four enumerated
reasons to argue for the change.  So, I thought I had done that, but
it apparently isn't very clear...and I'm left wondering how to clarify
it further.  So, a question for you: How should I change it?  Should I
just modify the third commit message to re-highlight that it does
change behavior and refer to the second commit message for details?
Because repeating the point is the only way I can think of to make it
clearer.  Is there anything else I can or should do?
quoted
I think based on the apparent different meanings of "basename" that
exist.  I tried to clarify that in response to his email, but I wanted
to clarify one additional thing here too:
quoted
diffcore-rename has not in the past based its decision solely on
content similarity.  It only does that when break detection is on.
Otherwise, 0% content similarity is trumped by sufficient filename
similarity (namely, with a filename similarity of 100%).  If the
filename similarity wasn't sufficiently high (anything less than an
exact match), then it completely ignored filename similarity and
looked only at content similarity.  It thus jumped from one extreme to
another.
This idea of optimizing first for 100% filename similarity is a
good perspective on Git's rename detection algorithm. The canonical
example of this 100% filename similarity is a rename cycle:

        A -> B
        B -> C
        C -> A

Even if the OIDs are distinct and exactly match across these renames,
we see that there are no adds or deletes, so we do not even trigger
rename detection and report A, B, and C as edited instead.

A "rename path" (not cycle) such as:

        A -> B
        B -> C

does trigger rename detection, but B will never be considered. Instead,
"A -> C" will be checked for similarity to see if it is within the
threshold.

Of course, I am _not_ advocating that we change this behavior. These
situations are incredibly rare and we should not sacrifice performance
in the typical case to handle them.
quoted
My optimization is adding an in-between state.  When the basename (the
part of the path excluding the leading directory) matches the basename
of another file (and those basenames are unique on each side), then
compare content similarity and mark the files as a rename if the two
are sufficiently similar.  It is thus a position that considers both
filename similarity (basename match) and content similarity together.
quoted
quoted
This could be documented in a test case, to demonstrate that
we are making this choice explicitly.
Yes.  I wonder if we can solve it by requiring a lot better than
minimum match when trying the "suffix match" first, or something?
This may still be a useful idea, and was something I had considered,
but more in the context of more generic filename similarity
comparisons.  We could still discuss it even when basenames match, but
basenames matching seems strong enough to me that I wasn't sure extra
configuration knobs were warranted.
I think this is a complication that we might not want to add to the
heuristic, at least not at first. We might want to have a follow-up
that adjusts that value to be higher. A natural way would be through
a config option, so users can select something incredibly high like
99%. Another option would be to take a minimum that is halfway between
the existing similarity minimum and 100%.
quoted
quoted
Provided if we agree that it is a good idea to insert this between
"exact contents match" and "full matrix", I have one question to
Elijah on what the code does.

To me, it seems that the "full matrix" part still uses the remaining
src and dst candidates fully.  But if "A.txt" and "B.txt" are still
surviving in the src/dst at that stage, shouldn't we be saying that
"no way these can be similar enough---we've checked in the middle
stage where only the ones with the same suffix are considered and
this pair didn't turn into a rename"?
This is a very good point.  A.txt and B.txt will not have been
compared previously since their basenames do not match, but the basic
idea is still possible.  For example, A.txt could have been compared
to source/some-module/A.txt.  And I don't do anything in the final
"full matrix" stage to avoid re-comparing those two files again.
However, it is worth noting that A.txt will have been compared to at
most one other file, not N files.  And thus while we are wasting some
re-comparisons, it is at most O(N) duplicated comparisons, not O(N^2).
I thought about that, but decided to not bother, based on the
following thinking:

1) The most expensive comparison is the first one, because when we do
that one, we first have to populate the list of integers that lines in
the file hash to.  Subsequent comparisons are relatively cheap since
this list of integers has already been computed.

2) This would only save us from at most N comparisons in the N x M
matrix (since no file in this optimization is compared to more than
one other)

3) Checking if two files have previously been compared requires more
code, in what is already a tight nested loop.  My experience
attempting to modify that tight loop for extra conditions (e.g. don't
compare files that are too large), is that it's easy to accidentally
make the code slower.  In fact, this is in part what led to the
addition of the remove_unneed_paths_from_src() function.
Even storing a single bit to say "these were already compared" takes
quadratic space. The hope is to not have quadratic behavior if it
can be avoided.
quoted
4) There were plenty of other interesting ideas and maybe I was a tad lazy.  :-)

I think removing these already-compared cases could be done, but I
just avoided it.  If we were to do the "attempt to match files with
the same extension" optimization that Stolee outlines/invents above,
then we'd definitely need to consider it.  Otherwise, it's just a
minor additional optimization that someone could add to my patches.
The more I think about it, the less my idea makes sense. I'm sorry
for adding noise to the thread.

Thanks,
-Stolee
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